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        <BiographicalNote>&lt;p&gt;Nicolas Beaudoin is an agronomist, working at INRA as research engineer. He contributed to the soil module conception and parameterisation. He uses STICS for predicting nitrate leaching and crop yield at several spatial scales and for studying the long term nitrogen balance of various cropping systems, including crop devoted to energy production.&lt;/p&gt;</BiographicalNote>
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        <BiographicalNote>&lt;p&gt;Patrice Lecharpentier is a developer at INRAE. He handles STICS maintenance and tools as well as testing and evaluation of STICS performances.&lt;br&gt;&lt;/p&gt;</BiographicalNote>
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        <PersonName>Dominique Ripoche-Wachter</PersonName>
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        <BiographicalNote>&lt;p&gt;Dominique Ripoche-Wachter is a computer engineer at INRAE. She has been in charge of developing the source code for the STICS model since the first versions of the model were released.&lt;br&gt;&lt;/p&gt;</BiographicalNote>
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        <PersonName>Loïc Strullu</PersonName>
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        <BiographicalNote language="fre">&lt;p&gt;Loïc Strullu is a freelance researcher who has developed new STICS model formalisms to improve the simulation of perennial crop production and environmental impacts.&lt;br&gt;&lt;/p&gt;</BiographicalNote>
        <BiographicalNote language="eng">&lt;p&gt;Dominique Ripoche-Wachter is a computer engineer at INRAE. She has been in charge of developing the source code for the STICS model since the first versions of the model were released.&lt;br&gt;&lt;/p&gt;</BiographicalNote>
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        <BiographicalNote>&lt;p&gt;Bruno Mary is a senior scientist, working at INRA. He developed the STICS modules devoted to the crop and soil nitrogen balance. For almost thirty years, he has been studying soil C and N cycles by associating experimental and modelling approaches, either with mechanistic or functional models. He collaborates in several programs concerning C and N storage, N gaseous emissions and N mineralization, in various agro-ecosystems&lt;/p&gt;</BiographicalNote>
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        <PersonName>Joël Léonard</PersonName>
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        <BiographicalNote language="fre">&lt;p&gt;Joël Léonard is a research scientist at INRAE. His research activities focus on soil N2O emissions. He developed the N2O module for the STICS model&lt;br&gt;&lt;/p&gt;</BiographicalNote>
        <BiographicalNote language="eng">&lt;p&gt;Joël Léonard is a research scientist at INRAE. His research activities focus on soil&amp;nbsp;&lt;span style="font-size:14.0pt;line-height:115%;font-family:&amp;quot;Calibri&amp;quot;,sans-serif;mso-ascii-theme-font:minor-latin;mso-fareast-font-family:SimSun;mso-hansi-theme-font:minor-latin;mso-bidi-font-family:&amp;quot;Times New Roman&amp;quot;;mso-bidi-theme-font:minor-bidi;color:black;mso-themecolor:text1;mso-ansi-language:EN-US;mso-fareast-language:EN-US;mso-bidi-language:AR-SA" lang="EN-US"&gt;N&lt;sub&gt;2&lt;/sub&gt;O&lt;/span&gt;&lt;style&gt;@font-face{font-family:SimSun;panose-1:2 1 6 0 3 1 1 1 1 1;mso-font-alt:宋体;mso-font-charset:134;mso-generic-font-family:auto;mso-font-pitch:variable;mso-font-signature:515 680460288 22 0 262145 0;}@font-face{font-family:"Cambria Math";panose-1:2 4 5 3 5 4 6 3 2 4;mso-font-charset:0;mso-generic-font-family:roman;mso-font-pitch:variable;mso-font-signature:3 0 0 0 1 0;}@font-face{font-family:Calibri;panose-1:2 15 5 2 2 2 4 3 2 4;mso-font-charset:0;mso-generic-font-family:swiss;mso-font-pitch:variable;mso-font-signature:-469750017 -1073732485 9 0 511 0;}@font-face{font-family:"\@SimSun";panose-1:2 1 6 0 3 1 1 1 1 1;mso-font-charset:134;mso-generic-font-family:auto;mso-font-pitch:variable;mso-font-signature:515 680460288 22 0 262145 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal{mso-style-unhide:no;mso-style-qformat:yes;mso-style-parent:"";margin-top:0cm;margin-right:0cm;margin-bottom:10.0pt;margin-left:0cm;line-height:115%;mso-pagination:widow-orphan;font-size:11.0pt;font-family:"Calibri",sans-serif;mso-ascii-font-family:Calibri;mso-ascii-theme-font:minor-latin;mso-fareast-font-family:SimSun;mso-hansi-font-family:Calibri;mso-hansi-theme-font:minor-latin;mso-bidi-font-family:"Times New Roman";mso-bidi-theme-font:minor-bidi;mso-fareast-language:EN-US;}.MsoChpDefault{mso-style-type:export-only;mso-default-props:yes;font-size:11.0pt;mso-ansi-font-size:11.0pt;mso-bidi-font-size:11.0pt;font-family:"Calibri",sans-serif;mso-ascii-font-family:Calibri;mso-ascii-theme-font:minor-latin;mso-fareast-font-family:SimSun;mso-hansi-font-family:Calibri;mso-hansi-theme-font:minor-latin;mso-bidi-font-family:"Times New Roman";mso-bidi-theme-font:minor-bidi;mso-fareast-language:EN-US;}.MsoPapDefault{mso-style-type:export-only;margin-bottom:10.0pt;line-height:115%;}div.WordSection1{page:WordSection1;}&lt;/style&gt; emissions. He developed the N2O module for the STICS model.&lt;br&gt;&lt;/p&gt;</BiographicalNote>
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        <BiographicalNote>&lt;p&gt;Marie Launay is a crop scientist, working at INRA. She is responsible for STICS agrophysiology and is particularly involved in STICS adaptation to new crops. She is in charge of training and communication about the model. She is now at the head of the research project on biotic stress formalizations into the crop model.&amp;nbsp;&lt;/p&gt;</BiographicalNote>
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        <PersonName>Éric Justes</PersonName>
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        <BiographicalNote>&lt;p&gt;Éric Justes is a senior scientist and agronomist who spent three decades at INRAE and is currently at CIRAD. He helped develop the model and was also a STICS team coordinator (2016–2022).&lt;br&gt;&lt;/p&gt;</BiographicalNote>
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        <Text language="fre">&lt;p&gt;The STICS crop model has been developed since 1996 at INRA (French National Institute for Agronomic Research) in collaboration with other research and technical institutes. The model syntheses, illustrates and concretizes an important part of the French agronomic knowledge as a point of view on the field and cropping systems working. The formalisations of the STICS crop model presented in this book can be considered as references used in the framework of crop sciences. They will help professionals and students in the partitioning and understanding of the complex agronomic system. The book arrangement relies on the way the model designs the crop-soil system functioning, each chapter being devoted to a set of important functions such as growth initiation, yield onset, water uptake, transformation of organic matter etc. One chapter deals with the cropping system and long term simulations and the final chapter is about the involvement of the user in terms of option choices and parameterization.&lt;/p&gt;&lt;p&gt;If this book is mainly intended for scientists who use the STICS model, it can also be useful for agronomists, crop modellers, students and technicians looking for elementary formalizations of the crop-soil system functioning.&lt;/p&gt;&lt;p&gt;&lt;br&gt;Projet financé avec le soutien du &lt;i&gt;Fonds National pour la Science Ouverte&lt;/i&gt;.&lt;/p&gt;</Text>
        <Text language="eng">&lt;p&gt;The STICS crop model has been developed since 1996 at INRA (French National Institute for Agronomic Research) in collaboration with other research and technical institutes. The model syntheses, illustrates and concretizes an important part of the French agronomic knowledge as a point of view on the field and cropping systems working. The formalisations of the STICS crop model presented in this book can be considered as references used in the framework of crop sciences. They will help professionals and students in the partitioning and understanding of the complex agronomic system. The book arrangement relies on the way the model designs the crop-soil system functioning, each chapter being devoted to a set of important functions such as growth initiation, yield onset, water uptake, transformation of organic matter etc. One chapter deals with the cropping system and long term simulations and the final chapter is about the involvement of the user in terms of option choices and parameterization.&lt;/p&gt;&lt;p&gt;If this book is mainly intended for scientists who use the STICS model, it can also be useful for agronomists, crop modellers, students and technicians looking for elementary formalizations of the crop-soil system functioning.&lt;/p&gt;&lt;p&gt;&amp;nbsp;&lt;/p&gt;&lt;p&gt;This book was funded with support from the French National Fund for Open Science.&lt;br&gt;&lt;/p&gt;</Text>
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        <Text language="fre">&lt;p&gt;The formalisations of the STICS crop model presented in this book can be considered as references used in the framework of crop sciences. They will help professionals and students in the partitioning and understanding of the complex agronomic system.&lt;/p&gt;&lt;p&gt;Projet financé avec le soutien du&amp;nbsp;&lt;i&gt;Fonds National pour la Science Ouverte&lt;/i&gt;.&lt;/p&gt;&lt;p class="Standard r2-no-focus-outline" tabindex="-1" style="text-align: justify; margin-top: 0.5em; margin-bottom: 0px; hyphens: inherit; outline: none !important; outline-offset: 2px !important;"&gt;&lt;font color="#121212" face="Lucida Sans Unicode, Lucida Grande, sans-serif"&gt;&lt;span style="font-size: 16px;"&gt;This project was funded with the support of the French National Fund for Open Science (FNSO).&lt;/span&gt;&lt;/font&gt;&lt;br&gt;&lt;/p&gt;</Text>
        <Text language="eng">&lt;p&gt;The formalisations of the STICS crop model presented in this book can be considered as references used in the framework of crop sciences. They will help professionals and students in the partitioning and understanding of the complex agronomic system.&lt;br&gt;&lt;/p&gt;</Text>
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        <Text language="fre">Foreword&lt;br&gt;&lt;i&gt;Peter Thorburn&lt;/i&gt;&lt;br&gt;Dedication&lt;br&gt;Preface&lt;br&gt;&lt;i&gt;Nicolas Beaudoin, Patrice Lecharpentier and Dominique Ripoche-Wachter&lt;/i&gt;&lt;br&gt;The first book&lt;br&gt;A new book based on an innovative approach&lt;br&gt;Project funding&lt;br&gt;English revision&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 1. Introduction&lt;/b&gt;&lt;br&gt;&lt;i&gt;Dominique Ripoche-Wachter, Nicolas Beaudoin and Eric Justes&lt;/i&gt;&lt;br&gt;1.1 History&lt;br&gt;1.2 Purpose&lt;br&gt;1.3 The STICS open book&lt;br&gt;1.4 Human-machine interfaces&lt;br&gt;1.5 Tools for STICS users&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 2. Overall description of the modelled system&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nicolas Beaudoin, Dominique Ripoche-Wachter, Marie Launay, Eric Justes and Nadine Brisson&lt;/i&gt;&lt;br&gt;2.1 Conceptual framework&lt;br&gt;2.2 STICS validity domain&lt;br&gt;2.3 Relationship and priority between processes&lt;br&gt;2.4 Model genericity&lt;br&gt;2.5 Parameterised crop species&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 3. Development&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nadine Brisson, Iñaki García de Cortázar Atauri, Marie Launay and Dominique Ripoche-Wachter&lt;/i&gt;&lt;br&gt;3.1 The importance of phenology on crop development&lt;br&gt;3.2 Simulated events&lt;br&gt;3.3 Main development processes&lt;br&gt;3.4 Emergence and initiation of crop development and growth&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 4. Shoot growth&lt;/b&gt;&lt;br&gt;&lt;i&gt;Loïc Strullu, Alain Mollier, Jean-Louis Durand and Nadine Brisson&lt;/i&gt;&lt;br&gt;4.1 Leaf dynamics&lt;br&gt;4.2 Radiation interception&lt;br&gt;4.3 Biomass production&lt;br&gt;4.4 Stress indices&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 5. Root growth&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nadine Brisson, Nicolas Beaudoin, Alain Mollier, Florent Chlebowski, Marie Launay and Loïc Strullu&lt;/i&gt;&lt;br&gt;5.1 Introduction&lt;br&gt;5.2 Vertical root growth&lt;br&gt;5.3 Root length density production and root distribution&lt;br&gt;5.4 Turnover of root biomass and N content allocation&lt;br&gt;5.5 Calculation of root density for water and nitrogen absorption&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 6. Nitrogen acquisition by plants&lt;/b&gt;&lt;br&gt;&lt;i&gt;Bruno Mary, Fabien Ferchaud, Loïc Strullu and Nadine Brisson&lt;/i&gt;&lt;br&gt;6.1 Nitrogen uptake by plants&lt;br&gt;6.2 Nitrogen fixation by legumes&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 7. Biomass and nitrogen partitioning&lt;/b&gt;&lt;br&gt;&lt;i&gt;Loïc Strullu, Jean-Louis Durand, Bruno Mary, Nicolas Beaudoin and Nadine Brisson&lt;/i&gt;&lt;br&gt;7.1 Introduction&lt;br&gt;7.2 Identified organs and compartments&lt;br&gt;7.3 Vegetative organs&lt;br&gt;7.4 Remobilisation of reserves&lt;br&gt;7.5 Harvested organs&lt;br&gt;7.6 Roots&lt;br&gt;7.7 Biomass and nitrogen partitioning after cut of forages&lt;br&gt;7.8 N and C inputs to the soil from perennial crops&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 8. Yield formation&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nadine Brisson, Iñaki García de Cortázar Atauri, Françoise Ruget and Benjamin Dumont&lt;/i&gt;&lt;br&gt;8.1 Quantitative yield&lt;br&gt;8.2 Yield quality&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 9. Canopy microclimate&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nadine Brisson, Marie Launay and Gaetan Louarn&lt;/i&gt;&lt;br&gt;9.1 Introduction&lt;br&gt;9.2 Radiation interception&lt;br&gt;9.3 Energy budget and crop temperature&lt;br&gt;9.4 Canopy moisture&lt;br&gt;9.5 Climate under shelter&lt;br&gt;9.6 Correcting temperatures for high altitude climates&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 10. Transfers in soil: water, nitrate and heat fluxes&lt;/b&gt;&lt;br&gt;&lt;i&gt;Joël Léonard, Bruno Mary, Guillaume Jego, Nicolas Beaudoin and Nadine Brisson&lt;/i&gt;&lt;br&gt;10.1 Water and nitrate fluxes&lt;br&gt;10.2 Soil temperature&lt;br&gt;10.3 Modifications of surface conditions that influence water and heat transfer&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 11. Water balance&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nadine Brisson, Remi Vezy, Dominique Ripoche-Wachter and Patrick Bertuzzi&lt;/i&gt;&lt;br&gt;11.1 Background and conceptual framework&lt;br&gt;11.2 Soil evaporation&lt;br&gt;11.3 Potential crop water requirements&lt;br&gt;11.4 Physical soil surface conditions&lt;br&gt;11.5 Plant transpiration and derived stresses&lt;br&gt;11.6 Water balance&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 12. Carbon and nitrogen transformations in soil and balances&lt;/b&gt;&lt;br&gt;&lt;i&gt;Bruno Mary, Fabien Ferchaud, Hugues Clivot and Joël Léonard&lt;/i&gt;&lt;br&gt;12.1 Organic and mineral C-N pools&lt;br&gt;12.2 Decomposition and mineralisation of organic matter&lt;br&gt;12.3 Nitrification&lt;br&gt;12.4 Denitrification&lt;br&gt;12.5 N2O emissions&lt;br&gt;12.6 Ammonia volatilisation&lt;br&gt;12.7 Carbon and nitrogen balances&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 13. Soil-crop management effects&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nadine Brisson, Bruno Mary and Dominique Ripoche-Wachter&lt;/i&gt;&lt;br&gt;13.1 Introduction&lt;br&gt;13.2 Crop management&lt;br&gt;13.3 Crop operations and soil tillage&lt;br&gt;13.4 Soil water management&lt;br&gt;13.5 Nitrogen and carbon inputs in soil&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 14. Ways of STICS use&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nicolas Beaudoin, Julie Constantin, Anne-Isabelle Graux, Gatien Falconnier, François Affholder,&lt;br&gt;Françoise Ruget and Laurent Ruiz&lt;/i&gt;&lt;br&gt;14.1 Defining the unit of simulation (USM)&lt;br&gt;14.2 Rotations and long-term simulations&lt;br&gt;14.3 Simulation over large spatial scales&lt;br&gt;14.4 Simulation with coupled models&lt;br&gt;14.5 Typology of STICS uses&lt;br&gt;14.6 Perspectives for model capacity extension toward agroecology&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 15. Tools for smart use of the standard STICS model version&lt;/b&gt;&lt;br&gt;&lt;i&gt;Dominique Ripoche, Christine Le Bas and Nadine Brisson&lt;/i&gt;&lt;br&gt;15.1 Driving use options&lt;br&gt;15.2 Strategy use options&lt;br&gt;15.3 Model formalism options&lt;br&gt;15.4 Parameterisation&lt;br&gt;15.5 Tools for users&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 16. Model capacity extension methods&lt;/b&gt;&lt;br&gt;&lt;i&gt;Samuel Buis, Guillaume Jego and Eric Casellas&lt;/i&gt;&lt;br&gt;16.1 Introduction&lt;br&gt;16.2 Evaluating model performances&lt;br&gt;16.3 Adapting STICS to a new crop or cultivar&lt;br&gt;16.4 Tools and rules for model coupling&lt;br&gt;References&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 17. Definition of symbols&lt;/b&gt;&lt;br&gt;17.1 Definition of parameters&lt;br&gt;17.2 Definition of output variables&lt;br&gt;17.3 Internal variables definition&lt;br&gt;Authors list</Text>
        <Text language="eng">&lt;p&gt;Dedication&lt;/p&gt;&lt;p&gt;Preface&lt;/p&gt;&lt;p&gt;1. Introduction&lt;/p&gt;&lt;p&gt;2. Overall description of the modelled system&lt;/p&gt;&lt;p&gt;3. Development&lt;/p&gt;&lt;p&gt;4. Shoot growth&lt;/p&gt;&lt;p&gt;5. Root growth&lt;/p&gt;&lt;p&gt;6. Nitrogen acquisition by plants&lt;/p&gt;&lt;p&gt;7. Biomass and nitrogen partitioning&lt;/p&gt;&lt;p&gt;8. Yield formation&lt;/p&gt;&lt;p&gt;9. Canopy microclimate&lt;/p&gt;&lt;p&gt;10. Transfers in soil: water, nitrate and heat fluxes&lt;/p&gt;&lt;p&gt;11. Water Balance&lt;/p&gt;&lt;p&gt;12. Carbon and nitrogen transformations in soil and balances&lt;/p&gt;&lt;p&gt;13. Soil-crop management effects&lt;/p&gt;&lt;p&gt;14. Ways of STICS use&lt;/p&gt;&lt;p&gt;15. Tools for smart use of the standard STICS model version&lt;/p&gt;&lt;p&gt;16. Model capacity extension methods&lt;/p&gt;&lt;p&gt;References&lt;/p&gt;&lt;p&gt;Appendices&lt;/p&gt;&lt;p&gt;Definition of symbols&lt;/p&gt;&lt;p&gt;Authors lis&lt;/p&gt;</Text>
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        <BiographicalNote language="fre">&lt;p&gt;Loïc Strullu is a freelance researcher who has developed new STICS model formalisms to improve the simulation of perennial crop production and environmental impacts.&lt;br&gt;&lt;/p&gt;</BiographicalNote>
        <BiographicalNote language="eng">&lt;p&gt;Dominique Ripoche-Wachter is a computer engineer at INRAE. She has been in charge of developing the source code for the STICS model since the first versions of the model were released.&lt;br&gt;&lt;/p&gt;</BiographicalNote>
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        <BiographicalNote>&lt;p&gt;Bruno Mary is a senior scientist, working at INRA. He developed the STICS modules devoted to the crop and soil nitrogen balance. For almost thirty years, he has been studying soil C and N cycles by associating experimental and modelling approaches, either with mechanistic or functional models. He collaborates in several programs concerning C and N storage, N gaseous emissions and N mineralization, in various agro-ecosystems&lt;/p&gt;</BiographicalNote>
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        <BiographicalNote language="fre">&lt;p&gt;Joël Léonard is a research scientist at INRAE. His research activities focus on soil N2O emissions. He developed the N2O module for the STICS model&lt;br&gt;&lt;/p&gt;</BiographicalNote>
        <BiographicalNote language="eng">&lt;p&gt;Joël Léonard is a research scientist at INRAE. His research activities focus on soil&amp;nbsp;&lt;span style="font-size:14.0pt;line-height:115%;font-family:&amp;quot;Calibri&amp;quot;,sans-serif;mso-ascii-theme-font:minor-latin;mso-fareast-font-family:SimSun;mso-hansi-theme-font:minor-latin;mso-bidi-font-family:&amp;quot;Times New Roman&amp;quot;;mso-bidi-theme-font:minor-bidi;color:black;mso-themecolor:text1;mso-ansi-language:EN-US;mso-fareast-language:EN-US;mso-bidi-language:AR-SA" lang="EN-US"&gt;N&lt;sub&gt;2&lt;/sub&gt;O&lt;/span&gt;&lt;style&gt;@font-face{font-family:SimSun;panose-1:2 1 6 0 3 1 1 1 1 1;mso-font-alt:宋体;mso-font-charset:134;mso-generic-font-family:auto;mso-font-pitch:variable;mso-font-signature:515 680460288 22 0 262145 0;}@font-face{font-family:"Cambria Math";panose-1:2 4 5 3 5 4 6 3 2 4;mso-font-charset:0;mso-generic-font-family:roman;mso-font-pitch:variable;mso-font-signature:3 0 0 0 1 0;}@font-face{font-family:Calibri;panose-1:2 15 5 2 2 2 4 3 2 4;mso-font-charset:0;mso-generic-font-family:swiss;mso-font-pitch:variable;mso-font-signature:-469750017 -1073732485 9 0 511 0;}@font-face{font-family:"\@SimSun";panose-1:2 1 6 0 3 1 1 1 1 1;mso-font-charset:134;mso-generic-font-family:auto;mso-font-pitch:variable;mso-font-signature:515 680460288 22 0 262145 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal{mso-style-unhide:no;mso-style-qformat:yes;mso-style-parent:"";margin-top:0cm;margin-right:0cm;margin-bottom:10.0pt;margin-left:0cm;line-height:115%;mso-pagination:widow-orphan;font-size:11.0pt;font-family:"Calibri",sans-serif;mso-ascii-font-family:Calibri;mso-ascii-theme-font:minor-latin;mso-fareast-font-family:SimSun;mso-hansi-font-family:Calibri;mso-hansi-theme-font:minor-latin;mso-bidi-font-family:"Times New Roman";mso-bidi-theme-font:minor-bidi;mso-fareast-language:EN-US;}.MsoChpDefault{mso-style-type:export-only;mso-default-props:yes;font-size:11.0pt;mso-ansi-font-size:11.0pt;mso-bidi-font-size:11.0pt;font-family:"Calibri",sans-serif;mso-ascii-font-family:Calibri;mso-ascii-theme-font:minor-latin;mso-fareast-font-family:SimSun;mso-hansi-font-family:Calibri;mso-hansi-theme-font:minor-latin;mso-bidi-font-family:"Times New Roman";mso-bidi-theme-font:minor-bidi;mso-fareast-language:EN-US;}.MsoPapDefault{mso-style-type:export-only;margin-bottom:10.0pt;line-height:115%;}div.WordSection1{page:WordSection1;}&lt;/style&gt; emissions. He developed the N2O module for the STICS model.&lt;br&gt;&lt;/p&gt;</BiographicalNote>
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        <PersonName>Marie Launay</PersonName>
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        <BiographicalNote>&lt;p&gt;Marie Launay is a crop scientist, working at INRA. She is responsible for STICS agrophysiology and is particularly involved in STICS adaptation to new crops. She is in charge of training and communication about the model. She is now at the head of the research project on biotic stress formalizations into the crop model.&amp;nbsp;&lt;/p&gt;</BiographicalNote>
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        <PersonName>Éric Justes</PersonName>
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        <BiographicalNote>&lt;p&gt;Éric Justes is a senior scientist and agronomist who spent three decades at INRAE and is currently at CIRAD. He helped develop the model and was also a STICS team coordinator (2016–2022).&lt;br&gt;&lt;/p&gt;</BiographicalNote>
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        <Text language="fre">&lt;p&gt;The STICS crop model has been developed since 1996 at INRA (French National Institute for Agronomic Research) in collaboration with other research and technical institutes. The model syntheses, illustrates and concretizes an important part of the French agronomic knowledge as a point of view on the field and cropping systems working. The formalisations of the STICS crop model presented in this book can be considered as references used in the framework of crop sciences. They will help professionals and students in the partitioning and understanding of the complex agronomic system. The book arrangement relies on the way the model designs the crop-soil system functioning, each chapter being devoted to a set of important functions such as growth initiation, yield onset, water uptake, transformation of organic matter etc. One chapter deals with the cropping system and long term simulations and the final chapter is about the involvement of the user in terms of option choices and parameterization.&lt;/p&gt;&lt;p&gt;If this book is mainly intended for scientists who use the STICS model, it can also be useful for agronomists, crop modellers, students and technicians looking for elementary formalizations of the crop-soil system functioning.&lt;/p&gt;&lt;p&gt;&lt;br&gt;Projet financé avec le soutien du &lt;i&gt;Fonds National pour la Science Ouverte&lt;/i&gt;.&lt;/p&gt;</Text>
        <Text language="eng">&lt;p&gt;The STICS crop model has been developed since 1996 at INRA (French National Institute for Agronomic Research) in collaboration with other research and technical institutes. The model syntheses, illustrates and concretizes an important part of the French agronomic knowledge as a point of view on the field and cropping systems working. The formalisations of the STICS crop model presented in this book can be considered as references used in the framework of crop sciences. They will help professionals and students in the partitioning and understanding of the complex agronomic system. The book arrangement relies on the way the model designs the crop-soil system functioning, each chapter being devoted to a set of important functions such as growth initiation, yield onset, water uptake, transformation of organic matter etc. One chapter deals with the cropping system and long term simulations and the final chapter is about the involvement of the user in terms of option choices and parameterization.&lt;/p&gt;&lt;p&gt;If this book is mainly intended for scientists who use the STICS model, it can also be useful for agronomists, crop modellers, students and technicians looking for elementary formalizations of the crop-soil system functioning.&lt;/p&gt;&lt;p&gt;&amp;nbsp;&lt;/p&gt;&lt;p&gt;This book was funded with support from the French National Fund for Open Science.&lt;br&gt;&lt;/p&gt;</Text>
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        <Text language="fre">&lt;p&gt;The formalisations of the STICS crop model presented in this book can be considered as references used in the framework of crop sciences. They will help professionals and students in the partitioning and understanding of the complex agronomic system.&lt;/p&gt;&lt;p&gt;Projet financé avec le soutien du&amp;nbsp;&lt;i&gt;Fonds National pour la Science Ouverte&lt;/i&gt;.&lt;/p&gt;&lt;p class="Standard r2-no-focus-outline" tabindex="-1" style="text-align: justify; margin-top: 0.5em; margin-bottom: 0px; hyphens: inherit; outline: none !important; outline-offset: 2px !important;"&gt;&lt;font color="#121212" face="Lucida Sans Unicode, Lucida Grande, sans-serif"&gt;&lt;span style="font-size: 16px;"&gt;This project was funded with the support of the French National Fund for Open Science (FNSO).&lt;/span&gt;&lt;/font&gt;&lt;br&gt;&lt;/p&gt;</Text>
        <Text language="eng">&lt;p&gt;The formalisations of the STICS crop model presented in this book can be considered as references used in the framework of crop sciences. They will help professionals and students in the partitioning and understanding of the complex agronomic system.&lt;br&gt;&lt;/p&gt;</Text>
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        <Text language="fre">Foreword&lt;br&gt;&lt;i&gt;Peter Thorburn&lt;/i&gt;&lt;br&gt;Dedication&lt;br&gt;Preface&lt;br&gt;&lt;i&gt;Nicolas Beaudoin, Patrice Lecharpentier and Dominique Ripoche-Wachter&lt;/i&gt;&lt;br&gt;The first book&lt;br&gt;A new book based on an innovative approach&lt;br&gt;Project funding&lt;br&gt;English revision&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 1. Introduction&lt;/b&gt;&lt;br&gt;&lt;i&gt;Dominique Ripoche-Wachter, Nicolas Beaudoin and Eric Justes&lt;/i&gt;&lt;br&gt;1.1 History&lt;br&gt;1.2 Purpose&lt;br&gt;1.3 The STICS open book&lt;br&gt;1.4 Human-machine interfaces&lt;br&gt;1.5 Tools for STICS users&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 2. Overall description of the modelled system&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nicolas Beaudoin, Dominique Ripoche-Wachter, Marie Launay, Eric Justes and Nadine Brisson&lt;/i&gt;&lt;br&gt;2.1 Conceptual framework&lt;br&gt;2.2 STICS validity domain&lt;br&gt;2.3 Relationship and priority between processes&lt;br&gt;2.4 Model genericity&lt;br&gt;2.5 Parameterised crop species&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 3. Development&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nadine Brisson, Iñaki García de Cortázar Atauri, Marie Launay and Dominique Ripoche-Wachter&lt;/i&gt;&lt;br&gt;3.1 The importance of phenology on crop development&lt;br&gt;3.2 Simulated events&lt;br&gt;3.3 Main development processes&lt;br&gt;3.4 Emergence and initiation of crop development and growth&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 4. Shoot growth&lt;/b&gt;&lt;br&gt;&lt;i&gt;Loïc Strullu, Alain Mollier, Jean-Louis Durand and Nadine Brisson&lt;/i&gt;&lt;br&gt;4.1 Leaf dynamics&lt;br&gt;4.2 Radiation interception&lt;br&gt;4.3 Biomass production&lt;br&gt;4.4 Stress indices&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 5. Root growth&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nadine Brisson, Nicolas Beaudoin, Alain Mollier, Florent Chlebowski, Marie Launay and Loïc Strullu&lt;/i&gt;&lt;br&gt;5.1 Introduction&lt;br&gt;5.2 Vertical root growth&lt;br&gt;5.3 Root length density production and root distribution&lt;br&gt;5.4 Turnover of root biomass and N content allocation&lt;br&gt;5.5 Calculation of root density for water and nitrogen absorption&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 6. Nitrogen acquisition by plants&lt;/b&gt;&lt;br&gt;&lt;i&gt;Bruno Mary, Fabien Ferchaud, Loïc Strullu and Nadine Brisson&lt;/i&gt;&lt;br&gt;6.1 Nitrogen uptake by plants&lt;br&gt;6.2 Nitrogen fixation by legumes&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 7. Biomass and nitrogen partitioning&lt;/b&gt;&lt;br&gt;&lt;i&gt;Loïc Strullu, Jean-Louis Durand, Bruno Mary, Nicolas Beaudoin and Nadine Brisson&lt;/i&gt;&lt;br&gt;7.1 Introduction&lt;br&gt;7.2 Identified organs and compartments&lt;br&gt;7.3 Vegetative organs&lt;br&gt;7.4 Remobilisation of reserves&lt;br&gt;7.5 Harvested organs&lt;br&gt;7.6 Roots&lt;br&gt;7.7 Biomass and nitrogen partitioning after cut of forages&lt;br&gt;7.8 N and C inputs to the soil from perennial crops&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 8. Yield formation&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nadine Brisson, Iñaki García de Cortázar Atauri, Françoise Ruget and Benjamin Dumont&lt;/i&gt;&lt;br&gt;8.1 Quantitative yield&lt;br&gt;8.2 Yield quality&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 9. Canopy microclimate&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nadine Brisson, Marie Launay and Gaetan Louarn&lt;/i&gt;&lt;br&gt;9.1 Introduction&lt;br&gt;9.2 Radiation interception&lt;br&gt;9.3 Energy budget and crop temperature&lt;br&gt;9.4 Canopy moisture&lt;br&gt;9.5 Climate under shelter&lt;br&gt;9.6 Correcting temperatures for high altitude climates&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 10. Transfers in soil: water, nitrate and heat fluxes&lt;/b&gt;&lt;br&gt;&lt;i&gt;Joël Léonard, Bruno Mary, Guillaume Jego, Nicolas Beaudoin and Nadine Brisson&lt;/i&gt;&lt;br&gt;10.1 Water and nitrate fluxes&lt;br&gt;10.2 Soil temperature&lt;br&gt;10.3 Modifications of surface conditions that influence water and heat transfer&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 11. Water balance&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nadine Brisson, Remi Vezy, Dominique Ripoche-Wachter and Patrick Bertuzzi&lt;/i&gt;&lt;br&gt;11.1 Background and conceptual framework&lt;br&gt;11.2 Soil evaporation&lt;br&gt;11.3 Potential crop water requirements&lt;br&gt;11.4 Physical soil surface conditions&lt;br&gt;11.5 Plant transpiration and derived stresses&lt;br&gt;11.6 Water balance&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 12. Carbon and nitrogen transformations in soil and balances&lt;/b&gt;&lt;br&gt;&lt;i&gt;Bruno Mary, Fabien Ferchaud, Hugues Clivot and Joël Léonard&lt;/i&gt;&lt;br&gt;12.1 Organic and mineral C-N pools&lt;br&gt;12.2 Decomposition and mineralisation of organic matter&lt;br&gt;12.3 Nitrification&lt;br&gt;12.4 Denitrification&lt;br&gt;12.5 N2O emissions&lt;br&gt;12.6 Ammonia volatilisation&lt;br&gt;12.7 Carbon and nitrogen balances&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 13. Soil-crop management effects&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nadine Brisson, Bruno Mary and Dominique Ripoche-Wachter&lt;/i&gt;&lt;br&gt;13.1 Introduction&lt;br&gt;13.2 Crop management&lt;br&gt;13.3 Crop operations and soil tillage&lt;br&gt;13.4 Soil water management&lt;br&gt;13.5 Nitrogen and carbon inputs in soil&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 14. Ways of STICS use&lt;/b&gt;&lt;br&gt;&lt;i&gt;Nicolas Beaudoin, Julie Constantin, Anne-Isabelle Graux, Gatien Falconnier, François Affholder,&lt;br&gt;Françoise Ruget and Laurent Ruiz&lt;/i&gt;&lt;br&gt;14.1 Defining the unit of simulation (USM)&lt;br&gt;14.2 Rotations and long-term simulations&lt;br&gt;14.3 Simulation over large spatial scales&lt;br&gt;14.4 Simulation with coupled models&lt;br&gt;14.5 Typology of STICS uses&lt;br&gt;14.6 Perspectives for model capacity extension toward agroecology&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 15. Tools for smart use of the standard STICS model version&lt;/b&gt;&lt;br&gt;&lt;i&gt;Dominique Ripoche, Christine Le Bas and Nadine Brisson&lt;/i&gt;&lt;br&gt;15.1 Driving use options&lt;br&gt;15.2 Strategy use options&lt;br&gt;15.3 Model formalism options&lt;br&gt;15.4 Parameterisation&lt;br&gt;15.5 Tools for users&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 16. Model capacity extension methods&lt;/b&gt;&lt;br&gt;&lt;i&gt;Samuel Buis, Guillaume Jego and Eric Casellas&lt;/i&gt;&lt;br&gt;16.1 Introduction&lt;br&gt;16.2 Evaluating model performances&lt;br&gt;16.3 Adapting STICS to a new crop or cultivar&lt;br&gt;16.4 Tools and rules for model coupling&lt;br&gt;References&lt;br&gt;&lt;br&gt;&lt;b&gt;Chapter 17. Definition of symbols&lt;/b&gt;&lt;br&gt;17.1 Definition of parameters&lt;br&gt;17.2 Definition of output variables&lt;br&gt;17.3 Internal variables definition&lt;br&gt;Authors list</Text>
        <Text language="eng">&lt;p&gt;Dedication&lt;/p&gt;&lt;p&gt;Preface&lt;/p&gt;&lt;p&gt;1. Introduction&lt;/p&gt;&lt;p&gt;2. Overall description of the modelled system&lt;/p&gt;&lt;p&gt;3. Development&lt;/p&gt;&lt;p&gt;4. Shoot growth&lt;/p&gt;&lt;p&gt;5. Root growth&lt;/p&gt;&lt;p&gt;6. Nitrogen acquisition by plants&lt;/p&gt;&lt;p&gt;7. Biomass and nitrogen partitioning&lt;/p&gt;&lt;p&gt;8. Yield formation&lt;/p&gt;&lt;p&gt;9. Canopy microclimate&lt;/p&gt;&lt;p&gt;10. Transfers in soil: water, nitrate and heat fluxes&lt;/p&gt;&lt;p&gt;11. Water Balance&lt;/p&gt;&lt;p&gt;12. Carbon and nitrogen transformations in soil and balances&lt;/p&gt;&lt;p&gt;13. Soil-crop management effects&lt;/p&gt;&lt;p&gt;14. Ways of STICS use&lt;/p&gt;&lt;p&gt;15. Tools for smart use of the standard STICS model version&lt;/p&gt;&lt;p&gt;16. Model capacity extension methods&lt;/p&gt;&lt;p&gt;References&lt;/p&gt;&lt;p&gt;Appendices&lt;/p&gt;&lt;p&gt;Definition of symbols&lt;/p&gt;&lt;p&gt;Authors lis&lt;/p&gt;</Text>
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